Microscopy Image Analysis Tutorial
At the MICCAI 2010 conference in Beijing, China
a Tutorial on Microscopy Image Analysis was presented.
The instructors who collaborated to deliver this tutorial included:
- Hanchuan Peng, HHMI – Janelia Farm Campus
- Sean Megason, Harvard University
- Jense Ritch, GE Research
- Fuhui Long, HHMI – Janelia Farm Campus
- Tianming Liu, University of Georgia
- Luis Ibanez, Kitware Inc.
Many topics were covered in this tutorial.
In particular a wide overview of the state of the art in the field.
As a tribute to traditional Chinese philosophy:
I hear and I forget
I see and I remember
I do and I understand
The tutorial included a set of hands-on exercises.
These exercises took advantage of the availability of the V3D application,
and the ITK Plugins developed for it.
All the presentations of the hands-on exercises are available
under the Creative Commons by Attribution License 3.0,
and can be downloaded from the MIDAS instance
They are in particular:
The appliance is available for download at the MIDAS instance here.
This virtual appliance contains the following:
- Ubuntu 10.04 – 32 bits
- ITK 3.20 source code
- V3D 2.86 source code
- ITK binary build
- V3D binary build
- ITK-V3D Plugins build
- The Open Office presentations
You can use the virtual appliance by simply installing VirtualBox
on your computer and then importing the appliance.